Package: rwicc 0.2.0.9000

Douglas Ezra Morrison

rwicc: Regression with Interval-Censored Covariates

Provides functions to simulate and analyze data for a regression model with an interval censored covariate, as described in Morrison et al. (2021) <doi:10.1111/biom.13472>.

Authors:Douglas Ezra Morrison [aut, cre, cph], Ron Brookmeyer [aut]

rwicc_0.2.0.9000.tar.gz
rwicc_0.2.0.9000.zip(r-4.7-any)rwicc_0.2.0.9000.zip(r-4.6-any)rwicc_0.2.0.9000.zip(r-4.5-any)
rwicc_0.2.0.9000.tgz(r-4.6-any)rwicc_0.2.0.9000.tgz(r-4.5-any)
rwicc_0.2.0.9000.tar.gz(r-4.7-any)rwicc_0.2.0.9000.tar.gz(r-4.6-any)
rwicc_0.2.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rwicc/json (API)

# Install 'rwicc' in R:

install.packages('rwicc', repos = c('https://morrison-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/d-morrison/rwicc/issues

On CRAN:

5.12 score 2 stars 11 scripts 349 downloads 10 exports 87 dependencies

Last updated from:0ba66920ce. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel	OK	196
source / vignettes	OK	307
linux-release	OK	184
macos-release	OK	192
macos-oldrel	OK	160
windows-devel	OK	103
windows-release	OK	131
windows-oldrel	OK	148
wasm-release	OK	142

Exports:build_event_date_possibilities_table build_omega_table fit_joint_model fit_midpoint_model fit_uniform_model graph_omega plot_CDF plot_censoring_data plot_phi_curves simulate_interval_censoring

Dependencies:abind arm askpass base64enc biglm boot bslib cachem cli coda cpp11 crayon crosstalk curl data.table DBI digest dplyr evaluate farver fastmap fontawesome fs generics ggplot2 ggrepel glue gtable highr htmltools htmlwidgets httr isoband jquerylib jsonlite knitr labeling later lattice lazyeval lifecycle lme4 lobstr lubridate magrittr MASS Matrix memoise mime minqa nlme nloptr openssl otel pillar pkgconfig plotly prettyunits promises purrr R6 rappdirs rbibutils RColorBrewer Rcpp RcppEigen Rdpack reformulas rlang rmarkdown S7 sass scales stringi stringr sys tibble tidyr tidyselect timechange tinytex utf8 vctrs viridisLite withr xfun yaml

how-to-use-rwicc

Rendered fromhow-to-use-rwicc.Rmdusingknitr::rmarkdown

Last update: 2026-05-27
Started: 2021-05-21

visualize-study-design

Rendered fromvisualize-study-design.Rmdusingknitr::rmarkdown

Last update: 2025-11-13
Started: 2023-03-21

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Build table of event date possibilities	build_event_date_possibilities_table
Build table of dates with possible seroconversions in dataset	build_omega_table
convert a pair of simple logistic regression coefficients into P(Y\|T) curve:	build_phi_function_from_coefs
compute mean window period duration from simple logistic regression coefficients	compute_mu
Fit a logistic regression model with an interval-censored covariate	fit_joint_model
Fit model using midpoint imputation	fit_midpoint_model
Fit model using uniform imputation	fit_uniform_model
Graph seroconversion hazard model	graph_omega
plot estimated and true CDFs for seroconversion date distribution	plot_CDF
Plot censoring data	plot_censoring_data
Plot true and estimated curves for P(Y=1\|T=t)	plot_phi_curves
rwicc: Regression with Interval-Censored Covariates	rwicc
Inverse survival function for time-to-event variable with linear hazard function	seroconversion_inverse_survival_function
Simulate a dataset with interval-censored seroconversion dates	simulate_interval_censoring